Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421847_0806 | Not Available | Negative | 828584 - 828964 | 15206.4 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05421847_0807 | Not Available | Negative | 829102 - 829812 | 26825.5 |
| cu+-exporting atpase | SAMN05421847_0808 | Not Available | Positive | 829899 - 832274 | 89833.3 |
| putative endopeptidase | SAMN05421847_0809 | Not Available | Negative | 832392 - 834425 | 77168.9 |
| cytochrome oxidase maturation protein, cbb3-type | SAMN05421847_0810 | Not Available | Positive | 834600 - 834806 | 7728.47 |
| cytochrome c oxidase cbb3-type subunit i/ii | SAMN05421847_0811 | Not Available | Positive | 834816 - 837098 | 86594.1 |
| cbb3-type cytochrome oxidase component fixq | SAMN05421847_0812 | Not Available | Positive | 837120 - 837326 | 7901.43 |
| cytochrome c oxidase cbb3-type subunit 3 | SAMN05421847_0813 | Not Available | Positive | 837333 - 838211 | 33014.4 |
| cytochrome c oxidase accessory protein fixg | SAMN05421847_0814 | Not Available | Positive | 838265 - 839716 | 55389.8 |
| fixh protein | SAMN05421847_0815 | Not Available | Positive | 839722 - 840177 | 17409.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
