Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421847_0795 | Not Available | Negative | 818765 - 819061 | 11502.5 |
| hypothetical protein | SAMN05421847_0796 | Not Available | Negative | 819081 - 819788 | 27191.8 |
| protein of unknown function | SAMN05421847_0797 | Not Available | Negative | 819808 - 820185 | 14472.2 |
| hypothetical protein | SAMN05421847_0798 | Not Available | Positive | 820374 - 820682 | 12366.9 |
| aconitase | SAMN05421847_0800 | Not Available | Positive | 821093 - 823369 | 81912.0 |
| beta-glucosidase | SAMN05421847_0801 | Not Available | Positive | 823719 - 825218 | 56731.2 |
| hypothetical protein | SAMN05421847_0802 | Not Available | Negative | 825481 - 826233 | 26323.4 |
| 23s rrna pseudouridine1911/1915/1917 synthase | SAMN05421847_0803 | Not Available | Negative | 826670 - 827347 | 25285.8 |
| hypothetical protein | SAMN05421847_0804 | Not Available | Negative | 827348 - 827674 | 11870.8 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | SAMN05421847_0805 | Not Available | Negative | 827674 - 828489 | 29785.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
