Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421847_0774 | Not Available | Negative | 800077 - 800562 | 18431.0 |
| putative hydrolase of the had superfamily | SAMN05421847_0775 | Not Available | Negative | 800563 - 801258 | 27664.7 |
| hypothetical protein | SAMN05421847_0776 | Not Available | Negative | 801290 - 801424 | 5081.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421847_0777 | Not Available | Negative | 801473 - 802063 | 23249.9 |
| hypothetical protein | SAMN05421847_0778 | Not Available | Negative | 802236 - 802721 | 17942.9 |
| methionine adenosyltransferase | SAMN05421847_0779 | Not Available | Negative | 802795 - 804075 | 47166.9 |
| lysr family transcriptional regulator, hydrogen peroxide-inducible genes activator | SAMN05421847_0780 | Not Available | Negative | 804264 - 805214 | 35931.6 |
| catalase | SAMN05421847_0781 | Not Available | Positive | 805313 - 806806 | 57481.6 |
| enoyl-coa hydratase | SAMN05421847_0782 | Not Available | Positive | 806859 - 807626 | 27638.2 |
| dcmp deaminase | SAMN05421847_0783 | Not Available | Positive | 807626 - 808060 | 16266.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
