Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| por secretion system c-terminal sorting domain-containing protein | SAMN05421847_0764 | Not Available | Negative | 789202 - 792717 | 129928.0 |
| isoleucyl-trna synthetase | SAMN05421847_0765 | Not Available | Positive | 792944 - 796342 | 130021.0 |
| transcriptional regulator, trar/dksa family | SAMN05421847_0766 | Not Available | Positive | 796412 - 796792 | 14429.3 |
| hypothetical protein | SAMN05421847_0767 | Not Available | Positive | 796807 - 797064 | 10313.5 |
| hypothetical protein | SAMN05421847_0768 | Not Available | Positive | 797066 - 797251 | 7320.06 |
| signal peptidase ii | SAMN05421847_0769 | Not Available | Positive | 797253 - 797891 | 24013.9 |
| hypothetical protein | SAMN05421847_0770 | Not Available | Positive | 797950 - 798243 | 11465.0 |
| uncharacterized conserved protein, contains hepn domain | SAMN05421847_0771 | Not Available | Positive | 798236 - 798583 | 13542.4 |
| tryptophanyl-trna synthetase | SAMN05421847_0772 | Not Available | Positive | 798616 - 799584 | 36535.1 |
| hypothetical protein | SAMN05421847_0773 | Not Available | Positive | 799619 - 800080 | 17665.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
