Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein-releasing system permease protein | SAMN05421847_0754 | Not Available | Negative | 780180 - 781409 | 45579.7 |
| uncharacterized conserved protein ybbc, duf1343 family | SAMN05421847_0755 | Not Available | Positive | 781414 - 782610 | 45449.1 |
| hypothetical protein | SAMN05421847_0756 | Not Available | Negative | 782672 - 782875 | 7665.5 |
| Trna-arg | Not Available | Not Available | Positive | 783222 - 783295 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 783363 - 783437 | Not Available |
| Trna-ser | Not Available | Not Available | Positive | 783458 - 783547 | Not Available |
| n-acetylmuramoyl-l-alanine amidase | SAMN05421847_0760 | Not Available | Positive | 783679 - 784686 | 38371.7 |
| arginase family protein | SAMN05421847_0761 | Not Available | Negative | 784703 - 785776 | 41409.3 |
| dna topoisomerase-1 | SAMN05421847_0762 | Not Available | Negative | 785853 - 788399 | 96307.9 |
| protein of unknown function | SAMN05421847_0763 | Not Available | Positive | 788504 - 788911 | 15555.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
