Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat-containing protein | SAMN05421847_0742 | Not Available | Positive | 767312 - 768052 | 28441.9 |
| oxygen tolerance | SAMN05421847_0743 | Not Available | Positive | 768052 - 769779 | 64856.7 |
| multiple antibiotic resistance protein | SAMN05421847_0744 | Not Available | Positive | 769821 - 770417 | 21661.4 |
| hypothetical protein | SAMN05421847_0745 | Not Available | Positive | 770429 - 770626 | 7330.13 |
| isochorismate synthase | SAMN05421847_0746 | Not Available | Negative | 771027 - 772007 | 37511.6 |
| 1,4-dihydroxy-2-naphthoyl-coa hydrolase | SAMN05421847_0747 | Not Available | Negative | 772009 - 772431 | 15448.6 |
| acyltransferase | SAMN05421847_0748 | Not Available | Negative | 772747 - 773313 | 21604.6 |
| phage shock protein c (pspc) family protein | SAMN05421847_0749 | Not Available | Negative | 773625 - 775316 | 63213.1 |
| transcriptional regulator, padr family | SAMN05421847_0750 | Not Available | Negative | 775321 - 775656 | 12913.6 |
| cystathionine beta-synthase | SAMN05421847_0752 | Not Available | Negative | 778958 - 779941 | 36254.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
