Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolases family 16 | SAMN05421847_0709 | Not Available | Negative | 729260 - 730090 | 30747.9 |
| ig-like domain (group 2) | SAMN05421847_0710 | Not Available | Negative | 730105 - 731511 | 50551.8 |
| hypothetical protein | SAMN05421847_0711 | Not Available | Negative | 731613 - 734747 | 117525.0 |
| fatty acid hydroxylase superfamily protein | SAMN05421847_0712 | Not Available | Negative | 735222 - 738044 | 107812.0 |
| hypothetical protein | SAMN05421847_0713 | Not Available | Negative | 738075 - 738329 | 9705.38 |
| hypothetical protein | SAMN05421847_0714 | Not Available | Negative | 738400 - 738798 | 15460.3 |
| pap2 superfamily protein | SAMN05421847_0715 | Not Available | Negative | 738848 - 739597 | 27838.2 |
| putative beta-lactamase-inhibitor-like, pepsy-like | SAMN05421847_0716 | Not Available | Negative | 739663 - 740103 | 16027.3 |
| 40-residue yvtn family beta-propeller repeat-containing protein | SAMN05421847_0717 | Not Available | Negative | 740240 - 741244 | 36474.5 |
| heavy metal efflux pump, czca family | SAMN05421847_0718 | Not Available | Negative | 741254 - 744307 | 112549.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
