Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase | SAMN05421847_0689 | Not Available | Negative | 702932 - 704068 | 43008.4 |
| hypothetical protein | SAMN05421847_0690 | Not Available | Positive | 704343 - 705017 | 25833.0 |
| tetratricopeptide repeat-containing protein | SAMN05421847_0691 | Not Available | Positive | 705029 - 705871 | 31936.0 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421847_0692 | Not Available | Positive | 705996 - 706691 | 25145.2 |
| peptidase family m28 | SAMN05421847_0693 | Not Available | Negative | 706916 - 707941 | 38621.3 |
| type i restriction enzyme r protein n terminus (hsdr_n) | SAMN05421847_0694 | Not Available | Negative | 708045 - 708479 | 17258.8 |
| dna polymerase iii, delta subunit | SAMN05421847_0695 | Not Available | Positive | 708485 - 709522 | 39032.5 |
| thioredoxin reductase (nadph) | SAMN05421847_0696 | Not Available | Positive | 709613 - 710551 | 33917.3 |
| crcb protein | SAMN05421847_0697 | Not Available | Positive | 710616 - 710981 | 13604.8 |
| Trna-ser | Not Available | Not Available | Positive | 711074 - 711158 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
