Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| drug resistance transporter, emrb/qaca subfamily | SAMN05421847_0668 | Not Available | Positive | 684595 - 685983 | 51167.4 |
| carbohydrate family 9 binding domain-like | SAMN05421847_0669 | Not Available | Negative | 686328 - 687143 | 31045.8 |
| uncharacterized membrane protein | SAMN05421847_0670 | Not Available | Positive | 687578 - 688153 | 21791.1 |
| uncharacterized fe-s cluster protein yjdi | SAMN05421847_0671 | Not Available | Positive | 688156 - 688362 | 7679.4 |
| hypothetical protein | SAMN05421847_0672 | Not Available | Positive | 688373 - 688663 | 10989.1 |
| hypothetical protein | SAMN05421847_0673 | Not Available | Positive | 688692 - 689144 | 16868.2 |
| na+/proline symporter | SAMN05421847_0674 | Not Available | Positive | 689245 - 690819 | 58399.0 |
| hypothetical protein | SAMN05421847_0675 | Not Available | Positive | 690899 - 691066 | 6817.45 |
| hypothetical protein | SAMN05421847_0676 | Not Available | Positive | 691294 - 691719 | 16745.8 |
| ligand-binding srpbcc domain-containing protein | SAMN05421847_0677 | Not Available | Positive | 691817 - 692296 | 18590.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
