Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421847_0658 | Not Available | Positive | 674048 - 674821 | 29821.0 |
| l-asparaginase | SAMN05421847_0659 | Not Available | Positive | 674882 - 675727 | 30404.9 |
| phenylalanyl-trna synthetase, alpha subunit | SAMN05421847_0660 | Not Available | Negative | 675832 - 676935 | 42203.7 |
| polyisoprenoid-binding protein ycei | SAMN05421847_0661 | Not Available | Negative | 676950 - 677609 | 24029.5 |
| abc-type fe3+/spermidine/putrescine transport systems, atpase components | SAMN05421847_0662 | Not Available | Positive | 677687 - 678622 | 35881.6 |
| phosphonoacetate hydrolase | SAMN05421847_0663 | Not Available | Negative | 678785 - 679117 | 12201.5 |
| 16s rrna (cytosine967-c5)-methyltransferase | SAMN05421847_0664 | Not Available | Positive | 679975 - 681177 | 46078.8 |
| hypothetical protein | SAMN05421847_0665 | Not Available | Positive | 681223 - 681636 | 15722.8 |
| putative dna-binding domain-containing protein | SAMN05421847_0666 | Not Available | Positive | 681623 - 682678 | 41757.0 |
| asparagine synthase (glutamine-hydrolysing) | SAMN05421847_0667 | Not Available | Positive | 682787 - 684460 | 63420.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
