Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421847_0608 | Not Available | Negative | 614719 - 615123 | 15663.8 |
| acyl-coa dehydrogenase | SAMN05421847_0609 | Not Available | Negative | 615153 - 616295 | 41688.1 |
| long-chain acyl-coa synthetase | SAMN05421847_0610 | Not Available | Positive | 616439 - 618211 | 66277.2 |
| phnb protein | SAMN05421847_0611 | Not Available | Negative | 618278 - 618709 | 16081.0 |
| hypothetical protein | SAMN05421847_0612 | Not Available | Negative | 618769 - 619257 | 18912.7 |
| hypothetical protein | SAMN05421847_0613 | Not Available | Negative | 619268 - 619795 | 20227.2 |
| protein of unknown function | SAMN05421847_0614 | Not Available | Negative | 619801 - 620256 | 17407.8 |
| alpha-2-macroglobulin family protein | SAMN05421847_0615 | Not Available | Negative | 620491 - 626457 | 228803.0 |
| hypothetical protein | SAMN05421847_0616 | Not Available | Positive | 626476 - 627234 | 30085.7 |
| dna replication and repair protein recf | SAMN05421847_0617 | Not Available | Positive | 627355 - 628434 | 41676.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
