Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421847_0049 | Not Available | Negative | 45629 - 46072 | 16932.4 |
| nadh dehydrogenase subunit h | SAMN05421847_0050 | Not Available | Negative | 46082 - 47155 | 39851.6 |
| nadh-quinone oxidoreductase subunit g | SAMN05421847_0051 | Not Available | Negative | 47159 - 48163 | 37738.9 |
| hypothetical protein | SAMN05421847_0052 | Not Available | Negative | 48194 - 49075 | 33513.8 |
| nadh-quinone oxidoreductase subunit f | SAMN05421847_0053 | Not Available | Negative | 49078 - 50439 | 49925.9 |
| nadh-quinone oxidoreductase subunit e | SAMN05421847_0054 | Not Available | Negative | 50451 - 50957 | 18930.3 |
| hypothetical protein | SAMN05421847_0055 | Not Available | Negative | 51020 - 51211 | 7315.26 |
| nadh dehydrogenase subunit d | SAMN05421847_0056 | Not Available | Negative | 51243 - 52514 | 48639.3 |
| nadh-quinone oxidoreductase subunit c | SAMN05421847_0057 | Not Available | Negative | 52545 - 53045 | 19699.8 |
| nadh-quinone oxidoreductase subunit b | SAMN05421847_0058 | Not Available | Negative | 53045 - 53599 | 20075.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
