Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421847_0598 | Not Available | Positive | 604033 - 605205 | 44296.7 |
| n-acetylmuramoyl-l-alanine amidase | SAMN05421847_0599 | Not Available | Positive | 605236 - 605862 | 23203.2 |
| uncharacterized membrane protein yoak, upf0700 family | SAMN05421847_0600 | Not Available | Positive | 606049 - 606798 | 28596.6 |
| mfs transporter, dha1 family, tetracycline resistance protein | SAMN05421847_0601 | Not Available | Negative | 606868 - 608109 | 44900.7 |
| tigr02757 family protein | SAMN05421847_0602 | Not Available | Negative | 608260 - 609075 | 32003.5 |
| ribonuclease z | SAMN05421847_0603 | Not Available | Negative | 609159 - 610076 | 35188.3 |
| xtp/ditp diphosphohydrolase | SAMN05421847_0604 | Not Available | Negative | 610106 - 610687 | 22076.8 |
| hypothetical protein | SAMN05421847_0605 | Not Available | Negative | 610734 - 611561 | 31239.6 |
| bacterial peptide chain release factor 3 (brf-3) | SAMN05421847_0606 | Not Available | Positive | 611731 - 613341 | 61122.2 |
| protein of unknown function | SAMN05421847_0607 | Not Available | Negative | 613572 - 614642 | 41240.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
