Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421847_0588 | Not Available | Negative | 596512 - 597486 | 37837.4 |
| hypothetical protein | SAMN05421847_0589 | Not Available | Positive | 597636 - 597899 | 9886.41 |
| doxx-like family protein | SAMN05421847_0590 | Not Available | Positive | 597994 - 598374 | 14705.8 |
| uncharacterized conserved protein (cog2071) | SAMN05421847_0591 | Not Available | Positive | 598381 - 599121 | 28991.0 |
| methyltransferase domain-containing protein | SAMN05421847_0592 | Not Available | Positive | 599109 - 599867 | 29636.3 |
| hypothetical protein | SAMN05421847_0593 | Not Available | Positive | 599851 - 600246 | 15495.6 |
| nitrate/nitrite transporter nark | SAMN05421847_0594 | Not Available | Positive | 600389 - 601639 | 44705.7 |
| tetratricopeptide repeat-containing protein | SAMN05421847_0595 | Not Available | Positive | 601703 - 602674 | 37148.1 |
| pentapeptide repeat-containing protein | SAMN05421847_0596 | Not Available | Positive | 602933 - 603508 | 22224.0 |
| cyth domain-containing protein | SAMN05421847_0597 | Not Available | Positive | 603524 - 603997 | 18499.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
