Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | SAMN05421847_0577 | Not Available | Positive | 587100 - 589223 | 79759.3 |
| hypothetical protein | SAMN05421847_0579 | Not Available | Positive | 589583 - 590053 | 18074.8 |
| hypothetical protein | SAMN05421847_0580 | Not Available | Positive | 590317 - 590847 | 20394.3 |
| ribosomal protein s18 acetylase rimi | SAMN05421847_0581 | Not Available | Positive | 590928 - 591446 | 19806.7 |
| pin domain-containing protein | SAMN05421847_0582 | Not Available | Positive | 591644 - 592063 | 16155.3 |
| hypothetical protein | SAMN05421847_0583 | Not Available | Positive | 592098 - 592256 | 5961.36 |
| purine-nucleoside phosphorylase | SAMN05421847_0584 | Not Available | Negative | 592365 - 593075 | 26236.2 |
| amidase | SAMN05421847_0585 | Not Available | Positive | 593523 - 595145 | 58492.9 |
| hypothetical protein | SAMN05421847_0586 | Not Available | Positive | 595334 - 595546 | 8183.31 |
| methyltransferase domain-containing protein | SAMN05421847_0587 | Not Available | Positive | 595666 - 596277 | 22669.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
