Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative endopeptidase | SAMN05421847_0566 | Not Available | Positive | 575794 - 577863 | 78054.4 |
| alpha/beta hydrolase fold | SAMN05421847_0567 | Not Available | Positive | 577952 - 578800 | 31893.0 |
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN05421847_0568 | Not Available | Negative | 578806 - 579630 | 30254.7 |
| gxxexxy protein | SAMN05421847_0569 | Not Available | Negative | 579708 - 580118 | 15816.4 |
| fumarylacetoacetate hydrolase | SAMN05421847_0570 | Not Available | Negative | 580196 - 581443 | 46682.1 |
| hypothetical protein | SAMN05421847_0571 | Not Available | Negative | 581518 - 581976 | 17663.3 |
| 4-hydroxyphenylpyruvate dioxygenase | SAMN05421847_0572 | Not Available | Negative | 582024 - 583154 | 42658.4 |
| transcriptional regulator, arsr family | SAMN05421847_0573 | Not Available | Positive | 583682 - 584011 | 11777.3 |
| methyltransferase domain-containing protein | SAMN05421847_0574 | Not Available | Positive | 584020 - 584856 | 30268.0 |
| gtp-binding protein | SAMN05421847_0576 | Not Available | Negative | 585139 - 586944 | 67378.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
