Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| undecaprenyl-diphosphatase | SAMN05421847_0556 | Not Available | Negative | 567253 - 568071 | 30273.9 |
| protein of unknown function | SAMN05421847_0557 | Not Available | Negative | 568203 - 568508 | 11657.5 |
| cell division transport system permease protein | SAMN05421847_0558 | Not Available | Negative | 568508 - 569404 | 33300.1 |
| 16s rrna (adenine1518-n6/adenine1519-n6)-dimethyltransferase | SAMN05421847_0559 | Not Available | Positive | 569541 - 570296 | 28771.0 |
| proline iminopeptidase | SAMN05421847_0560 | Not Available | Negative | 570527 - 571477 | 35890.1 |
| putative endonuclease | SAMN05421847_0561 | Not Available | Negative | 571803 - 572054 | 10143.2 |
| giy-yig catalytic domain-containing protein | SAMN05421847_0562 | Not Available | Negative | 572238 - 572414 | 7090.53 |
| Trna-met | Not Available | Not Available | Positive | 572458 - 572533 | Not Available |
| trna threonylcarbamoyl adenosine modification protein, sua5/ycio/yrdc/ywlc family | SAMN05421847_0564 | Not Available | Positive | 572624 - 573235 | 22549.3 |
| putative endopeptidase | SAMN05421847_0565 | Not Available | Positive | 573370 - 575454 | 77871.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
