Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transfer flavoprotein beta subunit | SAMN05421847_0526 | Not Available | Negative | 535766 - 536512 | 26497.0 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05421847_0527 | Not Available | Negative | 536691 - 537398 | 25686.6 |
| acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase | SAMN05421847_0528 | Not Available | Negative | 537476 - 538858 | 51213.3 |
| hypothetical protein | SAMN05421847_0529 | Not Available | Negative | 538967 - 539200 | 8258.19 |
| conserved hypothetical protein 95 | SAMN05421847_0530 | Not Available | Negative | 539266 - 540438 | 45097.6 |
| gxxexxy protein | SAMN05421847_0531 | Not Available | Negative | 540535 - 540912 | 14371.0 |
| methylmalonyl-coa mutase | SAMN05421847_0532 | Not Available | Negative | 541171 - 542337 | 44603.9 |
| cell division protein ftsb | SAMN05421847_0533 | Not Available | Negative | 542362 - 542721 | 14273.5 |
| uridine kinase | SAMN05421847_0534 | Not Available | Negative | 542721 - 543338 | 23563.3 |
| sana protein | SAMN05421847_0535 | Not Available | Negative | 543449 - 544069 | 23443.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
