Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| four helix bundle protein | SAMN05421847_0515 | Not Available | Negative | 526183 - 526437 | 9611.66 |
| s-adenosylmethionine--trna ribosyltransferase-isomerase | SAMN05421847_0516 | Not Available | Negative | 526626 - 527684 | 40405.6 |
| hypothetical protein | SAMN05421847_0517 | Not Available | Negative | 527837 - 528289 | 17448.0 |
| hypothetical protein | SAMN05421847_0518 | Not Available | Negative | 528523 - 528678 | 5966.08 |
| hypothetical protein | SAMN05421847_0519 | Not Available | Negative | 528714 - 529556 | 31977.3 |
| catechol 2,3-dioxygenase | SAMN05421847_0520 | Not Available | Negative | 529573 - 529950 | 14872.5 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN05421847_0522 | Not Available | Negative | 530188 - 532185 | 75757.3 |
| hypothetical protein | SAMN05421847_0523 | Not Available | Negative | 532203 - 534065 | 70955.4 |
| putative membrane protein | SAMN05421847_0524 | Not Available | Negative | 534247 - 534594 | 12518.0 |
| electron transfer flavoprotein alpha subunit apoprotein | SAMN05421847_0525 | Not Available | Negative | 534706 - 535656 | 33455.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
