Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, tetr family | SAMN05421847_0039 | Not Available | Negative | 36303 - 36899 | 22985.4 |
| maltose/moltooligosaccharide transporter | SAMN05421847_0040 | Not Available | Negative | 37258 - 37869 | 23170.6 |
| hypothetical protein | SAMN05421847_0041 | Not Available | Negative | 37921 - 38259 | 13282.8 |
| hypothetical protein | SAMN05421847_0042 | Not Available | Negative | 38474 - 38917 | 17243.9 |
| nadh-quinone oxidoreductase subunit n | SAMN05421847_0043 | Not Available | Negative | 39228 - 40607 | 50475.1 |
| nadh dehydrogenase subunit m | SAMN05421847_0044 | Not Available | Negative | 40790 - 42283 | 54673.3 |
| nadh-quinone oxidoreductase subunit l | SAMN05421847_0045 | Not Available | Negative | 42284 - 44179 | 70151.8 |
| nadh-quinone oxidoreductase subunit k | SAMN05421847_0046 | Not Available | Negative | 44186 - 44515 | 11840.0 |
| nadh dehydrogenase subunit j | SAMN05421847_0047 | Not Available | Negative | 44518 - 45015 | 17992.9 |
| nadh-quinone oxidoreductase subunit i | SAMN05421847_0048 | Not Available | Negative | 45020 - 45571 | 20733.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
