Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubiquinone biosynthesis protein | SAMN05421847_0453 | Not Available | Positive | 465292 - 466932 | 62344.8 |
| hypothetical protein | SAMN05421847_0454 | Not Available | Negative | 467028 - 467567 | 19142.0 |
| hypothetical protein | SAMN05421847_0455 | Not Available | Negative | 467603 - 470653 | 106259.0 |
| hypothetical protein | SAMN05421847_0456 | Not Available | Negative | 470778 - 471500 | 27442.2 |
| regulatory protein, luxr family | SAMN05421847_0457 | Not Available | Negative | 471639 - 471995 | 14462.6 |
| hypothetical protein | SAMN05421847_0458 | Not Available | Negative | 472082 - 473158 | 37791.8 |
| hypothetical protein | SAMN05421847_0459 | Not Available | Negative | 473275 - 474012 | 28230.4 |
| tetratricopeptide repeat-containing protein | SAMN05421847_0460 | Not Available | Negative | 474241 - 475680 | 56713.8 |
| atp-dependent rna helicase rhle | SAMN05421847_0461 | Not Available | Positive | 475935 - 477281 | 50593.5 |
| nadp-dependent alcohol dehydrogenase | SAMN05421847_0462 | Not Available | Negative | 477342 - 478505 | 43068.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
