Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| snoal-like domain-containing protein | SAMN05421847_0442 | Not Available | Positive | 452821 - 453348 | 20260.5 |
| maltose/moltooligosaccharide transporter | SAMN05421847_0443 | Not Available | Positive | 453345 - 454835 | 54263.3 |
| hypothetical protein | SAMN05421847_0444 | Not Available | Positive | 455126 - 455839 | 26832.7 |
| nad(p)h-dependent fmn reductase | SAMN05421847_0445 | Not Available | Positive | 455876 - 456418 | 20115.0 |
| phosphoribosylformylglycinamidine cyclo-ligase | SAMN05421847_0446 | Not Available | Positive | 456642 - 457631 | 35903.8 |
| formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase | SAMN05421847_0447 | Not Available | Positive | 457641 - 458210 | 20913.4 |
| phosphoribosylaminoimidazolecarboxamide formyltransferase / imp cyclohydrolase | SAMN05421847_0448 | Not Available | Positive | 458213 - 459724 | 55996.3 |
| phosphoribosylamine--glycine ligase | SAMN05421847_0449 | Not Available | Positive | 459888 - 461126 | 45530.7 |
| gmp synthase (glutamine-hydrolyzing) | SAMN05421847_0451 | Not Available | Positive | 461326 - 462855 | 56657.2 |
| outer membrane receptor proteins, mostly fe transport | SAMN05421847_0452 | Not Available | Negative | 462928 - 465081 | 82115.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
