Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-[acyl-carrier-protein] desaturase | SAMN05421847_0432 | Not Available | Positive | 437137 - 438117 | 37823.2 |
| uncharacterized membrane protein ygl010w | SAMN05421847_0433 | Not Available | Negative | 438207 - 438677 | 18384.3 |
| glutamate 5-kinase | SAMN05421847_0434 | Not Available | Negative | 438680 - 439465 | 28722.8 |
| glutamate-5-semialdehyde dehydrogenase | SAMN05421847_0435 | Not Available | Negative | 439446 - 440630 | 44275.5 |
| methionyl-trna synthetase | SAMN05421847_0436 | Not Available | Negative | 440635 - 442668 | 76891.3 |
| iron complex outermembrane recepter protein | SAMN05421847_0437 | Not Available | Positive | 442997 - 445732 | 99521.9 |
| starch-binding associating with outer membrane | SAMN05421847_0438 | Not Available | Positive | 445743 - 447341 | 58192.5 |
| suse outer membrane protein | SAMN05421847_0439 | Not Available | Positive | 447362 - 448405 | 37302.5 |
| glycosyl-hydrolase 97 c-terminal, oligomerisation | SAMN05421847_0440 | Not Available | Positive | 448484 - 450640 | 82204.2 |
| glycosidase | SAMN05421847_0441 | Not Available | Positive | 450694 - 452553 | 71860.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
