Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421847_0422 | Not Available | Positive | 426603 - 427145 | 21197.3 |
| hypothetical protein | SAMN05421847_0423 | Not Available | Positive | 427135 - 427827 | 26189.5 |
| hypothetical protein | SAMN05421847_0424 | Not Available | Positive | 427853 - 428950 | 41708.6 |
| hypothetical protein | SAMN05421847_0425 | Not Available | Positive | 429001 - 429417 | 15805.7 |
| acetyl-coa c-acetyltransferase | SAMN05421847_0426 | Not Available | Positive | 429534 - 430712 | 41311.0 |
| mfs transporter, umf1 family | SAMN05421847_0427 | Not Available | Positive | 430991 - 432460 | 55465.5 |
| hypothetical protein | SAMN05421847_0428 | Not Available | Positive | 432509 - 433372 | 34101.1 |
| mevalonate kinase | SAMN05421847_0429 | Not Available | Positive | 433473 - 434399 | 35249.7 |
| 4-hydroxybenzoate polyprenyltransferase | SAMN05421847_0430 | Not Available | Positive | 434417 - 435301 | 34437.2 |
| phosphoglycerate mutase | SAMN05421847_0431 | Not Available | Positive | 435506 - 437035 | 56406.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
