Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421847_0029 | Not Available | Positive | 27236 - 27790 | 20755.9 |
| hypothetical protein | SAMN05421847_0030 | Not Available | Positive | 27937 - 28347 | 15535.6 |
| xtp/ditp diphosphohydrolase | SAMN05421847_0031 | Not Available | Positive | 28425 - 29192 | 29777.5 |
| abc-2 type transport system permease protein | SAMN05421847_0032 | Not Available | Negative | 29328 - 30452 | 42691.4 |
| abc-2 type transport system permease protein | SAMN05421847_0033 | Not Available | Negative | 30668 - 31768 | 41028.4 |
| four helix bundle protein | SAMN05421847_0034 | Not Available | Negative | 31805 - 32167 | 13863.0 |
| abc-2 type transport system atp-binding protein | SAMN05421847_0035 | Not Available | Negative | 32225 - 32977 | 27971.7 |
| abc-type multidrug transport system, atpase component | SAMN05421847_0036 | Not Available | Negative | 32979 - 33902 | 34791.2 |
| hlyd family secretion protein | SAMN05421847_0037 | Not Available | Negative | 33965 - 34936 | 35884.1 |
| outer membrane protein tolc | SAMN05421847_0038 | Not Available | Negative | 35008 - 36255 | 47974.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
