Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421847_0391 | Not Available | Negative | 391704 - 391835 | 5252.6 |
| hypothetical protein | SAMN05421847_0392 | Not Available | Negative | 391786 - 392337 | 21761.9 |
| hypothetical protein | SAMN05421847_0393 | Not Available | Negative | 392494 - 392982 | 19645.6 |
| aldehyde dehydrogenase (nad+) | SAMN05421847_0394 | Not Available | Positive | 393468 - 395018 | 56234.8 |
| l-lysine 6-transaminase precursor | SAMN05421847_0395 | Not Available | Positive | 395064 - 396398 | 50866.2 |
| putative signal transducing protein | SAMN05421847_0396 | Not Available | Positive | 396457 - 396696 | 9222.09 |
| hypothetical protein | SAMN05421847_0397 | Not Available | Positive | 397078 - 397599 | 20588.9 |
| membrane fusion protein, multidrug efflux system | SAMN05421847_0398 | Not Available | Positive | 397772 - 398998 | 43979.9 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN05421847_0399 | Not Available | Positive | 398998 - 402147 | 113165.0 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN05421847_0400 | Not Available | Positive | 402164 - 403573 | 52833.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
