Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-[acyl-carrier-protein] reductase | SAMN05421847_0369 | Not Available | Negative | 371397 - 372200 | 29319.0 |
| hypothetical protein | SAMN05421847_0370 | Not Available | Negative | 372299 - 372598 | 11134.4 |
| dna-3-methyladenine glycosylase i | SAMN05421847_0371 | Not Available | Positive | 372739 - 373293 | 21585.9 |
| hypothetical protein | SAMN05421847_0372 | Not Available | Negative | 373332 - 373496 | 6255.17 |
| uridine phosphorylase | SAMN05421847_0373 | Not Available | Negative | 373501 - 374355 | 32403.9 |
| translation initiation factor 1 | SAMN05421847_0374 | Not Available | Negative | 374481 - 374804 | 12235.0 |
| 23s rrna pseudouridine2605 synthase | SAMN05421847_0375 | Not Available | Positive | 374888 - 375976 | 41279.7 |
| thioredoxin-like | SAMN05421847_0376 | Not Available | Positive | 375981 - 377309 | 50842.3 |
| uncharacterized lipoprotein yddw, upf0748 family | SAMN05421847_0377 | Not Available | Positive | 377378 - 378946 | 59575.1 |
| hypothetical protein | SAMN05421847_0378 | Not Available | Positive | 379046 - 380137 | 40584.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
