Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aquaporin z | SAMN05421847_0359 | Not Available | Negative | 360063 - 360809 | 27723.9 |
| helix-hairpin-helix motif-containing protein | SAMN05421847_0360 | Not Available | Positive | 360933 - 362102 | 45117.5 |
| por secretion system c-terminal sorting domain-containing protein | SAMN05421847_0361 | Not Available | Negative | 362133 - 363989 | 69858.7 |
| 3-oxoacid coa-transferase subunit a | SAMN05421847_0362 | Not Available | Positive | 364222 - 364920 | 25432.8 |
| hypothetical protein | SAMN05421847_0363 | Not Available | Positive | 365109 - 365339 | 9167.73 |
| atp-binding cassette, subfamily b | SAMN05421847_0364 | Not Available | Negative | 365385 - 367172 | 67282.3 |
| 3-oxoacid coa-transferase subunit b | SAMN05421847_0365 | Not Available | Positive | 367291 - 367944 | 23451.6 |
| hypothetical protein | SAMN05421847_0366 | Not Available | Negative | 367986 - 368516 | 20274.8 |
| tellurite resistance protein terc | SAMN05421847_0367 | Not Available | Negative | 368788 - 369876 | 41038.5 |
| zinc carboxypeptidase | SAMN05421847_0368 | Not Available | Positive | 370226 - 371329 | 42998.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
