Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein radc | SAMN05421847_0295 | Not Available | Positive | 294954 - 295631 | 25152.5 |
| hypothetical protein | SAMN05421847_0296 | Not Available | Positive | 295628 - 296521 | 34789.0 |
| hypothetical protein | SAMN05421847_0297 | Not Available | Positive | 296709 - 297230 | 20684.2 |
| inorganic pyrophosphatase | SAMN05421847_0298 | Not Available | Positive | 297244 - 297855 | 22485.6 |
| k(+)-stimulated pyrophosphate-energized sodium pump | SAMN05421847_0299 | Not Available | Positive | 298232 - 300958 | 95975.5 |
| hypothetical protein | SAMN05421847_0300 | Not Available | Negative | 301223 - 302293 | 42556.9 |
| hypothetical protein | SAMN05421847_0302 | Not Available | Negative | 303286 - 304170 | 33843.6 |
| 16s rrna (uracil1498-n3)-methyltransferase | SAMN05421847_0303 | Not Available | Negative | 304377 - 305093 | 27115.0 |
| n6-l-threonylcarbamoyladenine synthase | SAMN05421847_0304 | Not Available | Negative | 305097 - 306113 | 37168.0 |
| hypothetical protein | SAMN05421847_0305 | Not Available | Positive | 306116 - 310753 | 171104.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
