Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421847_0019 | Not Available | Negative | 16060 - 18882 | 109962.0 |
| protein of unknown function (4846) | SAMN05421847_0020 | Not Available | Positive | 19029 - 19829 | 30879.2 |
| orotate phosphoribosyltransferase | SAMN05421847_0021 | Not Available | Negative | 19848 - 21206 | 50524.9 |
| dna (cytosine-5)-methyltransferase 1 | SAMN05421847_0022 | Not Available | Positive | 21321 - 22562 | 46968.4 |
| type ii restriction endonuclease ecoo109i | SAMN05421847_0023 | Not Available | Negative | 22535 - 23266 | 28048.9 |
| cubico group peptidase, beta-lactamase class c family | SAMN05421847_0024 | Not Available | Positive | 23396 - 24937 | 57716.1 |
| hypothetical protein | SAMN05421847_0025 | Not Available | Positive | 25027 - 25389 | 14796.0 |
| phosphohistidine phosphatase | SAMN05421847_0026 | Not Available | Negative | 25500 - 25976 | 18108.2 |
| putative holliday junction resolvase | SAMN05421847_0027 | Not Available | Positive | 26196 - 26606 | 15497.1 |
| peptide deformylase | SAMN05421847_0028 | Not Available | Positive | 26609 - 27181 | 21768.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
