Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421847_0274 | Not Available | Positive | 272618 - 272953 | 13382.3 |
| hypothetical protein | SAMN05421847_0275 | Not Available | Positive | 272943 - 273059 | 4594.55 |
| pega domain-containing protein | SAMN05421847_0276 | Not Available | Positive | 273163 - 275550 | 89330.5 |
| peptidase family s41 | SAMN05421847_0278 | Not Available | Negative | 275668 - 277203 | 58759.6 |
| catalase-peroxidase | SAMN05421847_0279 | Not Available | Positive | 277393 - 279642 | 84199.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421847_0280 | Not Available | Positive | 279767 - 280273 | 19788.7 |
| hypothetical protein | SAMN05421847_0281 | Not Available | Positive | 280275 - 280868 | 23824.5 |
| predicted arabinose efflux permease, mfs family | SAMN05421847_0282 | Not Available | Positive | 280989 - 282179 | 44006.2 |
| hypothetical protein | SAMN05421847_0283 | Not Available | Negative | 282193 - 284589 | 90330.1 |
| hypothetical protein | SAMN05421847_0284 | Not Available | Positive | 284734 - 285129 | 15478.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
