Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transaldolase | SAMN05421847_0252 | Not Available | Positive | 246263 - 247348 | 40427.4 |
| putative hydrolase of the had superfamily | SAMN05421847_0253 | Not Available | Positive | 247348 - 247974 | 24506.6 |
| 6-phosphogluconate dehydrogenase | SAMN05421847_0254 | Not Available | Positive | 247976 - 249388 | 52730.1 |
| glucose-6-phosphate 1-dehydrogenase | SAMN05421847_0255 | Not Available | Positive | 249440 - 250963 | 58079.6 |
| 6-phosphogluconolactonase | SAMN05421847_0256 | Not Available | Positive | 250966 - 251700 | 27489.8 |
| dihydropteroate synthase | SAMN05421847_0257 | Not Available | Positive | 251710 - 252552 | 31933.4 |
| hypothetical protein | SAMN05421847_0258 | Not Available | Negative | 252650 - 252886 | 9267.45 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05421847_0259 | Not Available | Negative | 252907 - 253551 | 24825.6 |
| hypothetical protein | SAMN05421847_0260 | Not Available | Negative | 253609 - 256044 | 94024.7 |
| alanyl-trna synthetase | SAMN05421847_0261 | Not Available | Negative | 256157 - 258760 | 98133.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
