Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroneopterin aldolase | SAMN05421847_0242 | Not Available | Negative | 238185 - 238547 | 13627.6 |
| hypothetical protein | SAMN05421847_0243 | Not Available | Negative | 238544 - 239191 | 25869.2 |
| quinolinate synthetase | SAMN05421847_0244 | Not Available | Negative | 239204 - 240220 | 37753.0 |
| triosephosphate isomerase | SAMN05421847_0245 | Not Available | Negative | 240231 - 240989 | 27961.0 |
| hypothetical protein | SAMN05421847_0246 | Not Available | Negative | 240994 - 241344 | 13988.7 |
| doxx protein | SAMN05421847_0247 | Not Available | Negative | 241354 - 242478 | 42810.6 |
| four helix bundle protein | SAMN05421847_0248 | Not Available | Negative | 242482 - 242838 | 13996.0 |
| protein of unknown function | SAMN05421847_0249 | Not Available | Negative | 242942 - 243577 | 24821.0 |
| transketolase | SAMN05421847_0250 | Not Available | Positive | 243736 - 245742 | 74163.5 |
| ribose 5-phosphate isomerase b | SAMN05421847_0251 | Not Available | Positive | 245748 - 246209 | 16786.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
