Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eama domain-containing membrane protein rard | SAMN05421847_0232 | Not Available | Negative | 229516 - 230412 | 33787.1 |
| uncharacterized membrane protein ykva, duf1232 family | SAMN05421847_0233 | Not Available | Negative | 230916 - 231245 | 12403.7 |
| thiol-disulfide isomerase or thioredoxin | SAMN05421847_0234 | Not Available | Negative | 231301 - 231858 | 21251.8 |
| thioredoxin | SAMN05421847_0235 | Not Available | Negative | 231943 - 232554 | 23577.9 |
| chorismate synthase | SAMN05421847_0236 | Not Available | Negative | 232705 - 233766 | 38772.4 |
| hypothetical protein | SAMN05421847_0237 | Not Available | Negative | 233834 - 235465 | 63721.7 |
| Trna-cys | Not Available | Not Available | Positive | 235565 - 235638 | Not Available |
| uncharacterized membrane protein yckc, rdd family | SAMN05421847_0239 | Not Available | Negative | 235712 - 236215 | 19202.4 |
| protein of unknown function | SAMN05421847_0240 | Not Available | Negative | 236243 - 237610 | 51576.0 |
| hypothetical protein | SAMN05421847_0241 | Not Available | Negative | 237629 - 238171 | 21127.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
