Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ompa family protein | SAMN05421847_0222 | Not Available | Negative | 217863 - 219161 | 45416.7 |
| prolyl-trna synthetase | SAMN05421847_0223 | Not Available | Negative | 219267 - 220742 | 56542.6 |
| hypothetical protein | SAMN05421847_0224 | Not Available | Positive | 220887 - 221921 | 39593.6 |
| hypothetical protein | SAMN05421847_0225 | Not Available | Positive | 221954 - 223348 | 50442.2 |
| acyl-coa hydrolase | SAMN05421847_0226 | Not Available | Negative | 223431 - 224711 | 47008.9 |
| hypothetical protein | SAMN05421847_0227 | Not Available | Positive | 225051 - 225467 | 15617.7 |
| homogentisate 1,2-dioxygenase | SAMN05421847_0228 | Not Available | Negative | 225570 - 226724 | 44351.7 |
| hypothetical protein | SAMN05421847_0229 | Not Available | Negative | 226810 - 227565 | 29528.4 |
| hypothetical protein | SAMN05421847_0230 | Not Available | Negative | 227676 - 228410 | 27625.2 |
| hypothetical protein | SAMN05421847_0231 | Not Available | Negative | 228425 - 229507 | 39557.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
