Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| muts domain v | SAMN05421847_0212 | Not Available | Negative | 208879 - 210363 | 58048.2 |
| hypothetical protein | SAMN05421847_0213 | Not Available | Negative | 210423 - 211121 | 26917.3 |
| type i phosphodiesterase / nucleotide pyrophosphatase | SAMN05421847_0214 | Not Available | Positive | 211257 - 212882 | 60343.2 |
| protein of unknown function | SAMN05421847_0215 | Not Available | Negative | 213039 - 213569 | 19513.6 |
| hypothetical protein | SAMN05421847_0216 | Not Available | Negative | 213596 - 213787 | 7643.06 |
| hypothetical protein | SAMN05421847_0217 | Not Available | Positive | 213824 - 214153 | 13522.8 |
| molecular chaperone dnaj | SAMN05421847_0218 | Not Available | Negative | 214184 - 215299 | 40081.7 |
| molecular chaperone grpe | SAMN05421847_0219 | Not Available | Negative | 215392 - 215946 | 21147.9 |
| manganese transport protein | SAMN05421847_0220 | Not Available | Negative | 216183 - 217532 | 49473.7 |
| hypothetical protein | SAMN05421847_0221 | Not Available | Positive | 217578 - 217733 | 5976.53 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
