Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421847_0201 | Not Available | Positive | 197713 - 198180 | 17560.9 |
| fic/doc family protein | SAMN05421847_0203 | Not Available | Positive | 199234 - 200319 | 41848.2 |
| hypothetical protein | SAMN05421847_0204 | Not Available | Positive | 200566 - 200658 | 3531.49 |
| thioredoxin-like | SAMN05421847_0205 | Not Available | Positive | 200874 - 201389 | 19381.5 |
| hypothetical protein | SAMN05421847_0206 | Not Available | Positive | 201497 - 202531 | 40464.4 |
| endonuclease-8 | SAMN05421847_0207 | Not Available | Positive | 202569 - 203303 | 28182.6 |
| cysteine synthase | SAMN05421847_0208 | Not Available | Negative | 203337 - 204266 | 33680.5 |
| serine o-acetyltransferase | SAMN05421847_0209 | Not Available | Negative | 204360 - 205175 | 30887.7 |
| malate dehydrogenase (nad) | SAMN05421847_0210 | Not Available | Positive | 205470 - 206396 | 32390.4 |
| n-acetylated-alpha-linked acidic dipeptidase | SAMN05421847_0211 | Not Available | Negative | 206516 - 208741 | 82282.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
