Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c | SAMN05421847_0181 | Not Available | Negative | 175030 - 175506 | 17822.4 |
| molecular chaperone dnak | SAMN05421847_0182 | Not Available | Positive | 175785 - 177677 | 67910.3 |
| helix-turn-helix domain-containing protein | SAMN05421847_0183 | Not Available | Positive | 178076 - 178387 | 11893.6 |
| serine/threonine-protein kinase hipa | SAMN05421847_0184 | Not Available | Positive | 178396 - 179643 | 47289.9 |
| fic family protein | SAMN05421847_0185 | Not Available | Positive | 180093 - 181193 | 42087.6 |
| atpase family associated with various cellular activities (aaa) | SAMN05421847_0186 | Not Available | Positive | 181614 - 183278 | 65150.9 |
| hypothetical protein | SAMN05421847_0187 | Not Available | Positive | 183407 - 183640 | 8490.13 |
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN05421847_0188 | Not Available | Positive | 183747 - 184664 | 36408.6 |
| protein of unknown function | SAMN05421847_0189 | Not Available | Positive | 184675 - 186150 | 56894.5 |
| hypothetical protein | SAMN05421847_0190 | Not Available | Positive | 186337 - 187014 | 26855.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
