Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper chaperone copz | SAMN05421847_1944 | Not Available | Positive | 2011488 - 2011847 | 13114.9 |
| mercuric reductase | SAMN05421847_1945 | Not Available | Positive | 2011844 - 2013496 | 59747.8 |
| hypothetical protein | SAMN05421847_1946 | Not Available | Negative | 2013767 - 2014600 | 32167.6 |
| hypothetical protein | SAMN05421847_1947 | Not Available | Negative | 2014631 - 2015266 | 23780.9 |
| protein of unknown function | SAMN05421847_1948 | Not Available | Negative | 2015269 - 2015673 | 16066.0 |
| cellulose biosynthesis protein bcsq | SAMN05421847_1949 | Not Available | Negative | 2015685 - 2016452 | 29127.2 |
| hypothetical protein | SAMN05421847_1950 | Not Available | Positive | 2017151 - 2017582 | 16670.4 |
| relaxase/mobilisation nuclease domain-containing protein | SAMN05421847_1951 | Not Available | Positive | 2017591 - 2018877 | 48665.7 |
| tram recognition site of trad and trag | SAMN05421847_1952 | Not Available | Positive | 2018980 - 2020980 | 76380.5 |
| transcriptional regulator, arsr family | SAMN05421847_1953 | Not Available | Positive | 2021083 - 2021757 | 25269.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
