Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-thr | Not Available | Not Available | Positive | 1968422 - 1968498 | Not Available |
| putative sigma-54 modulation protein | SAMN05421847_1892 | Not Available | Negative | 1968599 - 1968889 | 10792.3 |
| integrase/recombinase xerc | SAMN05421847_1893 | Not Available | Negative | 1968916 - 1969800 | 33759.6 |
| small subunit ribosomal protein s21 | SAMN05421847_1894 | Not Available | Negative | 1969877 - 1970074 | 7519.29 |
| dna repair protein rada/sms | SAMN05421847_1895 | Not Available | Negative | 1970136 - 1971488 | 49367.1 |
| rep element-mobilizing transposase rayt | SAMN05421847_1896 | Not Available | Negative | 1971712 - 1972275 | 21950.5 |
| hypothetical protein | SAMN05421847_1897 | Not Available | Negative | 1972328 - 1972759 | 16491.5 |
| dienelactone hydrolase | SAMN05421847_1898 | Not Available | Positive | 1972852 - 1973595 | 26679.9 |
| ctp synthase | SAMN05421847_1900 | Not Available | Positive | 1973923 - 1975575 | 62132.1 |
| yidc/oxa1 family membrane protein insertase | SAMN05421847_1901 | Not Available | Positive | 1975761 - 1977548 | 68185.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
