Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lsu ribosomal protein l10p | SAMN05421847_1881 | Not Available | Negative | 1963682 - 1964185 | 18566.5 |
| large subunit ribosomal protein l1 | SAMN05421847_1882 | Not Available | Negative | 1964199 - 1964888 | 24547.1 |
| lsu ribosomal protein l11p | SAMN05421847_1883 | Not Available | Negative | 1964900 - 1965343 | 15667.2 |
| transcription antitermination protein nusg | SAMN05421847_1884 | Not Available | Negative | 1965714 - 1966256 | 20461.2 |
| Trna-trp | Not Available | Not Available | Positive | 1966494 - 1966567 | Not Available |
| preprotein translocase subunit sece | SAMN05421847_1885 | Not Available | Negative | 1966278 - 1966505 | 8263.11 |
| translation elongation factor 1a (ef-1a/ef-tu) | SAMN05421847_1887 | Not Available | Negative | 1966622 - 1967809 | 43229.8 |
| Trna-thr | Not Available | Not Available | Positive | 1968060 - 1968134 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 1968180 - 1968255 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 1968325 - 1968405 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
