Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit beta | SAMN05421847_1870 | Not Available | Negative | 1949200 - 1953027 | 143127.0 |
| hypothetical protein | SAMN05421847_1871 | Not Available | Negative | 1953446 - 1954039 | 20645.1 |
| hypothetical protein | SAMN05421847_1872 | Not Available | Negative | 1954117 - 1956498 | 83902.8 |
| hypothetical protein | SAMN05421847_1873 | Not Available | Negative | 1956501 - 1956806 | 11106.4 |
| hypothetical protein | SAMN05421847_1874 | Not Available | Negative | 1956932 - 1957582 | 24518.4 |
| hypothetical protein | SAMN05421847_1876 | Not Available | Negative | 1958731 - 1959279 | 18884.8 |
| hypothetical protein | SAMN05421847_1877 | Not Available | Negative | 1959356 - 1961947 | 89924.2 |
| hypothetical protein | SAMN05421847_1878 | Not Available | Negative | 1961950 - 1962297 | 12505.2 |
| hypothetical protein | SAMN05421847_1879 | Not Available | Negative | 1962443 - 1963060 | 23344.9 |
| lsu ribosomal protein l12p | SAMN05421847_1880 | Not Available | Negative | 1963240 - 1963608 | 12537.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
