Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hdig domain-containing protein | SAMN05421847_1835 | Not Available | Positive | 1910078 - 1911502 | 53810.1 |
| vitamin b12 transporter | SAMN05421847_1836 | Not Available | Negative | 1911663 - 1913567 | 70840.8 |
| ntf2 fold immunity protein | SAMN05421847_1837 | Not Available | Negative | 1913922 - 1914233 | 11780.1 |
| uncharacterized zinc-type alcohol dehydrogenase-like protein | SAMN05421847_1838 | Not Available | Negative | 1914642 - 1915700 | 38323.9 |
| hypothetical protein | SAMN05421847_1841 | Not Available | Negative | 1916718 - 1917224 | 19430.6 |
| hypothetical protein | SAMN05421847_1842 | Not Available | Negative | 1917218 - 1917460 | 9193.01 |
| alpha-amylase | SAMN05421847_1843 | Not Available | Negative | 1917597 - 1919072 | 56807.9 |
| dna polymerase-4 | SAMN05421847_1844 | Not Available | Negative | 1919434 - 1920510 | 40980.4 |
| hypothetical protein | SAMN05421847_1845 | Not Available | Positive | 1921604 - 1922287 | 25507.3 |
| hypothetical protein | SAMN05421847_1846 | Not Available | Positive | 1922296 - 1922958 | 26597.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
