Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421847_1825 | Not Available | Negative | 1902093 - 1902602 | 19748.7 |
| nad+ synthase | SAMN05421847_1826 | Not Available | Negative | 1902668 - 1903459 | 29765.4 |
| hypothetical protein | SAMN05421847_1827 | Not Available | Positive | 1903639 - 1904601 | 37649.6 |
| gliding motility-associated protein gldc | SAMN05421847_1828 | Not Available | Positive | 1904714 - 1905040 | 12597.9 |
| cystathionine beta-lyase | SAMN05421847_1829 | Not Available | Positive | 1905129 - 1906274 | 41759.3 |
| dinb superfamily protein | SAMN05421847_1830 | Not Available | Positive | 1906359 - 1906850 | 18966.6 |
| rep element-mobilizing transposase rayt | SAMN05421847_1831 | Not Available | Positive | 1907184 - 1907615 | 17194.5 |
| g/u mismatch-specific uracil-dna glycosylase | SAMN05421847_1832 | Not Available | Positive | 1907618 - 1908106 | 18898.0 |
| probable oxidoreductase, llm family | SAMN05421847_1833 | Not Available | Negative | 1908180 - 1909199 | 37806.6 |
| l-threonylcarbamoyladenylate synthase | SAMN05421847_1834 | Not Available | Positive | 1909363 - 1909911 | 20540.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
