Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| merr hth family regulatory protein | SAMN05421847_1804 | Not Available | Negative | 1883360 - 1883644 | 11361.5 |
| curved dna-binding protein | SAMN05421847_1805 | Not Available | Negative | 1883646 - 1884587 | 34892.3 |
| hydroxymethylglutaryl-coa synthase | SAMN05421847_1806 | Not Available | Negative | 1884784 - 1886109 | 50198.6 |
| hypothetical protein | SAMN05421847_1807 | Not Available | Negative | 1886477 - 1886959 | 19085.8 |
| aminopeptidase n | SAMN05421847_1809 | Not Available | Negative | 1887224 - 1889731 | 94002.1 |
| plasmid stabilization system protein pare | SAMN05421847_1810 | Not Available | Negative | 1889808 - 1890116 | 12224.0 |
| hypothetical protein | SAMN05421847_1811 | Not Available | Negative | 1890113 - 1890352 | 9348.98 |
| hypothetical protein | SAMN05421847_1812 | Not Available | Negative | 1890459 - 1890959 | 19535.2 |
| thymidylate synthase | SAMN05421847_1813 | Not Available | Negative | 1890973 - 1891767 | 30092.9 |
| hypothetical protein | SAMN05421847_1814 | Not Available | Negative | 1892044 - 1892484 | 16614.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
