Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac-type dna-binding protein | SAMN05421847_1793 | Not Available | Positive | 1867980 - 1869056 | 41498.0 |
| glyoxalase superfamily enzyme, possibly 3-demethylubiquinone-9 3-methyltransferase | SAMN05421847_1795 | Not Available | Positive | 1870263 - 1870730 | 17474.7 |
| l-alanine-dl-glutamate epimerase | SAMN05421847_1796 | Not Available | Positive | 1870947 - 1872008 | 39880.8 |
| rhamnosyltransferase | SAMN05421847_1797 | Not Available | Negative | 1872014 - 1872958 | 37379.4 |
| glutaminyl-trna synthetase | SAMN05421847_1798 | Not Available | Positive | 1873145 - 1874830 | 65751.9 |
| hypothetical protein | SAMN05421847_1799 | Not Available | Negative | 1874874 - 1875074 | 7642.06 |
| thioredoxin reductase (nadph) | SAMN05421847_1800 | Not Available | Negative | 1875133 - 1876092 | 36303.6 |
| magnesium chelatase subunit i | SAMN05421847_1801 | Not Available | Negative | 1876251 - 1877708 | 55003.9 |
| hypothetical protein | SAMN05421847_1802 | Not Available | Negative | 1877790 - 1878941 | 43824.5 |
| gliding motility-associated c-terminal domain-containing protein | SAMN05421847_1803 | Not Available | Negative | 1879079 - 1883296 | 155495.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
