Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase domain-containing protein | SAMN05421847_1782 | Not Available | Positive | 1857634 - 1858362 | 28593.3 |
| zip zinc transporter | SAMN05421847_1783 | Not Available | Positive | 1858364 - 1859062 | 25815.7 |
| protein of unknown function | SAMN05421847_1784 | Not Available | Negative | 1859091 - 1859696 | 23709.1 |
| thioredoxin-like | SAMN05421847_1785 | Not Available | Negative | 1859701 - 1860876 | 44411.0 |
| Trna-phe | Not Available | Not Available | Positive | 1861077 - 1861152 | Not Available |
| putative hemolysin | SAMN05421847_1787 | Not Available | Negative | 1861243 - 1863084 | 71104.8 |
| aspartate kinase | SAMN05421847_1788 | Not Available | Negative | 1863114 - 1864352 | 47120.1 |
| fructose-1,6-bisphosphatase i | SAMN05421847_1789 | Not Available | Positive | 1864571 - 1865587 | 37564.5 |
| hypothetical protein | SAMN05421847_1791 | Not Available | Positive | 1866140 - 1866568 | 16803.5 |
| hypothetical protein | SAMN05421847_1792 | Not Available | Positive | 1866921 - 1867637 | 27515.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
