Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-barrel assembly machine subunit bama | SAMN05421847_1772 | Not Available | Negative | 1843766 - 1846318 | 95102.7 |
| undecaprenyl diphosphate synthase | SAMN05421847_1773 | Not Available | Negative | 1846340 - 1847143 | 30886.2 |
| outer membrane protein beta-barrel domain-containing protein | SAMN05421847_1774 | Not Available | Negative | 1847094 - 1847945 | 32139.0 |
| capsular exopolysaccharide family | SAMN05421847_1775 | Not Available | Negative | 1848181 - 1850670 | 94023.3 |
| protein involved in gliding motility epsa | SAMN05421847_1776 | Not Available | Negative | 1850675 - 1851544 | 31719.9 |
| udp-n-acetylmuramyl pentapeptide phosphotransferase/udp-n-acetylglucosamine-1-phosphate transferase | SAMN05421847_1777 | Not Available | Negative | 1851555 - 1852670 | 42181.3 |
| epsg family protein | SAMN05421847_1778 | Not Available | Negative | 1852675 - 1853802 | 43928.7 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421847_1779 | Not Available | Negative | 1853819 - 1854808 | 38797.8 |
| glycosyltransferase, gt2 family | SAMN05421847_1780 | Not Available | Negative | 1854973 - 1855974 | 38203.0 |
| putative n6-adenine-specific dna methylase | SAMN05421847_1781 | Not Available | Negative | 1856034 - 1857203 | 45056.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
