Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421847_1752 | Not Available | Negative | 1822733 - 1823224 | 19333.0 |
| hypothetical protein | SAMN05421847_1753 | Not Available | Negative | 1823598 - 1824152 | 21477.3 |
| hypothetical protein | SAMN05421847_1754 | Not Available | Negative | 1824296 - 1825159 | 33016.6 |
| hypothetical protein | SAMN05421847_1755 | Not Available | Negative | 1825460 - 1825897 | 16614.4 |
| hypothetical protein | SAMN05421847_1756 | Not Available | Negative | 1825909 - 1827351 | 53046.4 |
| hypothetical protein | SAMN05421847_1757 | Not Available | Positive | 1827712 - 1828017 | 11906.1 |
| hypothetical protein | SAMN05421847_1758 | Not Available | Negative | 1828346 - 1829083 | 29054.2 |
| aipr protein | SAMN05421847_1759 | Not Available | Negative | 1829428 - 1831800 | 91953.4 |
| putative pd-(d/e)xk family member | SAMN05421847_1760 | Not Available | Negative | 1831804 - 1832775 | 37100.4 |
| z1 domain-containing protein | SAMN05421847_1761 | Not Available | Negative | 1832772 - 1835618 | 109586.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
