Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zn-dependent amino-or carboxypeptidase, m28 family | SAMN05421847_0161 | Not Available | Negative | 153054 - 154412 | 49896.1 |
| voltage-gated potassium channel | SAMN05421847_0162 | Not Available | Negative | 154578 - 155351 | 29699.9 |
| uncharacterized conserved protein, duf1015 family | SAMN05421847_0163 | Not Available | Negative | 155559 - 156797 | 48160.9 |
| d-3-phosphoglycerate dehydrogenase | SAMN05421847_0164 | Not Available | Negative | 156798 - 157757 | 35105.8 |
| phosphoserine aminotransferase apoenzyme | SAMN05421847_0165 | Not Available | Negative | 157763 - 158827 | 39505.3 |
| 4fe-4s dicluster domain-containing protein | SAMN05421847_0166 | Not Available | Negative | 158942 - 159292 | 12438.5 |
| acyl-coa reductase (luxc) | SAMN05421847_0167 | Not Available | Positive | 159350 - 160384 | 40390.0 |
| hypothetical protein | SAMN05421847_0168 | Not Available | Positive | 160423 - 161109 | 25408.8 |
| hypothetical protein | SAMN05421847_0169 | Not Available | Positive | 161187 - 161645 | 18046.8 |
| protein of unknown function | SAMN05421847_0170 | Not Available | Negative | 161663 - 161977 | 12455.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
